BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004D12SP1|AL425256
(433 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 775 0.0
>3x_Contig1619
Length = 7770
Score = 775 bits (382), Expect = 0.0
Identities = 416/434 (95%), Gaps = 2/434 (0%)
Strand = Plus / Minus
Query: 1 gatctaattaatatataattccgcggattatcataagaatgataatccgcgggatacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7690 gatctaattaatatataattccgcggattatcataagaatgataatccgcgggatacaat 7631
Query: 61 attatatttcccacgcgggtcatccaaccctatggttggacccgcgtgggggttattaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7630 attatatttcccacgcgggtcatccaaccctatggttggacccgcgtgggggttattaga 7571
Query: 121 ttatwatatattatattaatttattaaattatattawtattatttttkwttttkattctc 180
|||| ||||||||||||||||||||||||||||||| |||||||| | |||| ||||||
Sbjct: 7570 ttataatatattatattaatttattaaattatattaatattatttataattttgattctc 7511
Query: 181 catatagacaattgaatacttttcccgcggrcttatcccctggaattatcagaggrtaag 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 7510 catatagacaattgaatacttttcccgcggacttatcccctggaattatcagaggataag 7451
Query: 241 tccgcggggtttattaatatyatvvbmataatattaatggtaattatatagttatatagt 300
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 7450 tccgcggggtttattaatattataataataatattaatggtaattatatagttatatagt 7391
Query: 301 aattatatgttccaattacatgttatgttcccctccctacgcvccrtgtgtgtgcgatag 360
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 7390 aattatatgttccaattacatgttatgttcccctccctacgcaccatgtgtgtgcgatag 7331
Query: 361 ggaggaataattggtaatatcctccccgcsgcatcacccaaccgtatggtt-ggtgaggc 419
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||
Sbjct: 7330 ggaggaataattggtaatatcctccccgcggcatcacccaaccgtatggttgggtga-gc 7272
Query: 420 cgcggggctattat 433
||||||||||||||
Sbjct: 7271 cgcggggctattat 7258
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2465
Number of Sequences: 1807
Number of extensions: 2465
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 433
length of database: 10,358,551
effective HSP length: 15
effective length of query: 418
effective length of database: 10,331,446
effective search space: 4318544428
effective search space used: 4318544428
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)